CDS

Accession Number TCMCG057C15830
gbkey CDS
Protein Id XP_018477924.1
Location join(5113610..5113725,5113823..5113985,5114082..5114242,5114321..5114425,5114520..5115278,5115359..5115536,5115667..5115838,5115930..5116318)
Gene LOC108848952
GeneID 108848952
Organism Raphanus sativus

Protein

Length 680aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018622422.1
Definition PREDICTED: geranylgeranyl transferase type-2 subunit alpha 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category O
Description Geranylgeranyl transferase type-2 subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K14050        [VIEW IN KEGG]
EC 2.5.1.60        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003008        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0004661        [VIEW IN EMBL-EBI]
GO:0004663        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005968        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007600        [VIEW IN EMBL-EBI]
GO:0007601        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008318        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0017016        [VIEW IN EMBL-EBI]
GO:0017137        [VIEW IN EMBL-EBI]
GO:0018342        [VIEW IN EMBL-EBI]
GO:0018344        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0031267        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043687        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050877        [VIEW IN EMBL-EBI]
GO:0050953        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097354        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCACGGTCGTCCAAGGAAGGTTTACAAGCCGGAAGAGGAAGCAGCCTCCGCTGCTAAAGCCGTTAAGTTCCGATCTCTCCAGTCTCAGTTCCTGTCCAACCACCATAACAAAATTTATACCAAGGAAGCTATTGACTTGAGCACGAAGCTCTTAGAGATCAACCCGGAGGCGTACACTGCGTGGAACTACCGTAAGCTCGCCGTTGAAGATACCCTTTCACGACAAGAGTCCGATCCAGACTTGGTCAAGTCAGTTCTCGATGAAGAGCTTAAAGTGGTAGAAAGTTCTTTGAAGCAGAACGTCAAGTCATACGGTGCTTGGCATCATCGTAAGTGGGTTTTGAGTAAAGGTCATTCCTCCGTAGGGAACGAGTTACGACTTTTGAATGAGTTCCAGACCCTTGATTCCAGGAACTTTCACGCTTGGAACTATCGCAGGTTCGTTGTGGAGCTAACCAATAGGTCAAAACATGATGAGTTGAAGTATACAGAGTTTATGATCGGTAACAATATCAGCAACTATTCTGCTTGGCATAATCGTAGTGTGCTTCTTTCAAGTTTGCTTGAAAGAAAGGCTGACGGGTTCATGCCAAGTCAAAAGATTCCTGAAGAATATGAACTTGTGCATAATGCTATCTTTACAGACGAAGACGTCCAAAGTGGGTGGTTTTATCATCTTTGGCTTCTTGATCAAACTGTTAATGTGGAGACTCCTCTTCTCATTTCCTCATGGCCTCCACATGGTTCCCGTATCAATCTATCTAGAGCTGGGTGCTTAAACGACTCTTCTTCTTCTTCTAAGCTCACTACTTTTCCACTGATTCTTTACTTTGACCAAGCTGTTGGTGGAGTAAGCTCTTCTACTGTTGCGATTGATTCTGAACTGAAAGGAATTGAGGACCTTGTTTGGGAGCCAGTTTCGAATAACAACTCACAGGTGTCTTGTGTATGGGTTGCTCGTCTTAAATATATGAGTTCAGAACCTTGCTTCTTCCCCAAGGAATACAAAGTGAAGGTCAGAATTGGGAACTCTCCAGGAATTGTTTCTTCCAGAGGATGTAACTTCAGCGTTCCTTATGAGTTCGTCTTCACAGCTCGTGTTGAAGACACCACCGTCCAAGAAGAGCCGCGAGAAGTGATTGTTTCATGGACGGATGGTTTTGATATTTGGGATGCACAGTCAGAGGATTTCAAAAATCTCGTCAACTTGGATCAACTAAATGCTCAGATGGATTTTAAATGGCGTCAGGAAGCTATAGCGGAAGAGATTGAGTTGTTTCGTACATTGCCTGACAGTAACAGCAAAATTGGAAAGCTTACTATTGCAAGGCTTTTGATGGCTAAAGCTACGATGTCAGAGAATGATGTTAAGGGTGTTCACTATGAAGAAATCCTCAAACTGTATAATGATCTAATGGCGCTGGACTCTACGCACTATCATTACTACAAGGATGAGCACAGCGTAGCTTTACTCTGCAAGGTAACTTCAAGCACTGAATCTTTGTCAAGACACCTGTTTCGATACAGCGATATGAACAATTCTGTATGTCTGCGGCTGAATAACTTATCGCTATCTCGGATAGCCTCTGTCGAGAAGTTGCTGTTTGTCCAAATGTTAGATCTCAGTCACAATGAGCTTCATTCAACTGAAGGATTGGAGGCAATGCAACTTCTTTCTTGTCTAAATCTGAGTCACAACAGAATCCGGAGTTTTTCAGCACTGGACTCTCTAAGACATCTGAAACAGCTGAGAGTGTTGGATGTTTCACACAACCACATAGGCGAGCACTCGGTTGACACAACGAGGTACCTTTGTTCTTCACCGCTCTCTAATTCGGAGTGGACTCAAGATGAAGCTGGAAGACGGATGACGCCTAGTCTGGTCACCAAATACTGGGATGCGTATTTTGTGTTGAGAGATTTGAATCTGAAACAGTTGGATATAGCAGGCAACGTAATCGCAGGGGACGAGTTCAGCTCCTTTGTGCCACAGGTTGTGCCAACGCTTGTATGGCTCAATGGCCAGAAACTTAGGAGTTAG
Protein:  
MHGRPRKVYKPEEEAASAAKAVKFRSLQSQFLSNHHNKIYTKEAIDLSTKLLEINPEAYTAWNYRKLAVEDTLSRQESDPDLVKSVLDEELKVVESSLKQNVKSYGAWHHRKWVLSKGHSSVGNELRLLNEFQTLDSRNFHAWNYRRFVVELTNRSKHDELKYTEFMIGNNISNYSAWHNRSVLLSSLLERKADGFMPSQKIPEEYELVHNAIFTDEDVQSGWFYHLWLLDQTVNVETPLLISSWPPHGSRINLSRAGCLNDSSSSSKLTTFPLILYFDQAVGGVSSSTVAIDSELKGIEDLVWEPVSNNNSQVSCVWVARLKYMSSEPCFFPKEYKVKVRIGNSPGIVSSRGCNFSVPYEFVFTARVEDTTVQEEPREVIVSWTDGFDIWDAQSEDFKNLVNLDQLNAQMDFKWRQEAIAEEIELFRTLPDSNSKIGKLTIARLLMAKATMSENDVKGVHYEEILKLYNDLMALDSTHYHYYKDEHSVALLCKVTSSTESLSRHLFRYSDMNNSVCLRLNNLSLSRIASVEKLLFVQMLDLSHNELHSTEGLEAMQLLSCLNLSHNRIRSFSALDSLRHLKQLRVLDVSHNHIGEHSVDTTRYLCSSPLSNSEWTQDEAGRRMTPSLVTKYWDAYFVLRDLNLKQLDIAGNVIAGDEFSSFVPQVVPTLVWLNGQKLRS